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Mutating a Residue in UCSF Chimera (Part 1)
This video demonstrates how to make a mutation and accommodate said mutation using USCF Chimera.
Conformational Change Tutorial (UCSF Chimera)
A tutorial video for creating a "Morph Movie" between two conformations of protein structures.
Viewing SwissDock predictions in UCSF Chimera
Viewing SwissDock predictions in UCSF Chimera.III.
A look at molecules that replicate the HIV virus genome. I created this animation for display on a planetarium dome at the 2012 Biophysical Society meeting i...
Chimera: How to open an autoPACK result file in Chimera1.8
To load an autoPACK model into Chimera 1.8, you need a nightly build of Chimera that is more recent than January 16. The .apr (autoPACK result) file format s...
Human Hepatitis B - PDB: 1qgt © 2010 JYS - Rotate to 5-fold and 3-fold icosahedral axes
Human Hepatitis B Viral Capsid - (PDB entry 1qgt ) - Rendered with UCSF Chimera (radial depth cue). More images and movies on Virusworld at http://www.virolo...
Denovo Motif Analysis Using TOMTOM
This video shows analysis of denovo motifs against known motif databases using the TOMTOM module in the MEME suite of software.
Multiple Sequence Alignment Using ClustalX (Part 1)
This video describes how to perform a multiple sequence alignment using the ClustalX software. The video also discusses the appropriate types of sequence dat...
Multiple Sequence Alignment Using ClustalX (Part 2)
Phylogenetic Input Data File Formats (FASTA)
This video provides an introduction to FASTA, one of the three main input data file formats used in the majority of the phylogenetic analysis software.
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